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| Publications |
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| Anatomical Atlas |
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- Nowinski Wl, Chua BC, Volkau I, Puspitasari F, Marchenko Y, Runge VM, Knopp MV: Simulation and assessment of cerebrovascular damage in deep brain stimulation using a stereotactic atlas of vasculature and structure derived from multiple 3T and 7T scans. Journal of Neurosurgery (in press).
- Nowinski WL: The Cerefy Brain Atlases: Continuous enhancement of the electronic Talairach-Tournoux brain atlas. Neuroinformatics 2005;3(4):293-300. [ pdf ]
- Nowinski WL: Electronic brain atlases: features and applications, In: 3D Image Processing: Techniques and Clinical Applications (eds. Caramella D, Bartolozzi C). Medical Radiology series, Springer-Verlag, 2002:79-93. [ pdf ]
- Nowinski WL, Fang A, Nguyen BT, Raphel JK, Jagannathan L, Raghavan R, Bryan RN, Miller G: Multiple brain atlas database and atlas-based neuroimaging system. Computer Aided Surgery 1997;2(1):42-66. [ pdf ]
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| Probabilistic Functional Atlas |
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- Nowinski WL, Belov D, A. Thirunavuukarasuu, Benabid AL: A probabilistic functional atlas of the VIM nucleus constructed from pre-, intra- and post-operative electrophysiological and neuroimaging data acquired during the surgical treatment of Parkinson’s disease patients. Stereotactic and Functional Neurosurgery 2006 Jan;83(5-6):190-196. [ pdf ]
- Nowinski WL, Belov D, Pollack P, Benabid AL: Statistical analysis of 168 bilateral subthalamic nucleus implantations by means of the probabilistic functional atlas. Neurosurgery 2005 Oct;57(4 Suppl):319-330. [ pdf ]
- Nowinski WL, Belov D, Pollak P, Benabid AL: A probabilistic functional atlas of the human subthalamic nucleus. Neuroinformatics 2004;2(4):381-398. [ pdf ]
- Nowinski WL, Belov D, Benabid AL: An algorithm for rapid calculation of a probabilistic functional atlas of subcortical structures from electrophysiological data collected during functional neurosurgery procedures. NeuroImage 2003;18(1):143-155. [ pdf ]
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| Vascular Atlas |
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- Nowinski Wl, Chua BC, Volkau I, Puspitasari F, Marchenko Y, Runge VM, Knopp MV: Simulation and assessment of cerebrovascular damage in deep brain stimulation using a stereotactic atlas of vasculature and structure derived from multiple 3T and 7T scans. Journal of Neurosurgery (in press).
- Nowinski WL, A. Thirunnavuukarasuu, Volkau I, Marchenko Y, Aminah B, Puspitasaari F, Runge VM: A three-dimensional interactive atlas of cerebral arterial variants. RNeuroinformatics 2009, 7(4):255-264.
- Nowinski WL, Volkau I, Marchenko Y, A Thirunavuukarasuu, Ng TT, Runge VM: A 3D model of the human cerebrovasculature derived from 3 tesla magnetic resonance angiography. Neuroinformatics 2009;7(1):23-36.
- Nowinski WL, Thirunavuukarasuu A, Volkau I, Baimuratov R, Hu Q, Aziz A, Huang S: Three-dimensional atlas of the brain anatomy and vasculature. Radiographics 2005;25(1):263-271. [ pdf ]
- Volkau I, Zheng W, Aziz A, Baimouratov R, Nowinski WL: Geometric modeling of the human normal cerebral arterial system. IEEE Transactions on Medical Imaging (a special issue on vascular imaging) 2005;24(4):529-539. [ pdf ]
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| Atlas of Blood Supply Territories |
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- Nowinski WL, Qian G, Bhanu Prakash KN, Thirunavuukarasuu A, Hu QM, Ivanov N, Parimal AS, Runge VL, Beauchamp NJ: Analysis of ischemic stroke MR images by means of brain atlases of anatomy and blood supply territories. Academic Radiology 2006;13(8):1025-1034.
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| Atlas General |
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- Liu J, Nowinski WL: A hybrid approach to shape-based interpolation of stereotactic atlases of the human brain. Neuroinformatics 2006;4:177-198.
- Nowinski WL: Human brain atlases in education, research and clinical applications. In: Complex Medical Engineering (Eds. Wu JL, Ito K, Tobimatsu S, Nishida T, Fukuyama H), Springer-Verlag, Tokyo 2006:2006:335-349.
- Nowinski WL: Model enhanced neuroimaging: clinical, research, educational applications. In: Yearbook of Medical Informatics 2002:132-144. [ pdf ]
- Nowinski WL: Analysis of medical images by means of brain atlases. Computer Graphics and Vision 1999;8(3):449-468.
- Serra L, Nowinski WL, Poston T, Ng H, Lee CM, Chua GG, Pillay PK: The Brain Bench: virtual tools for stereotactic frame neurosurgery. Medical Image Analysis, 1997;1(4):317-329. [ pdf ]
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| Atlas-to-Data Mapping |
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- Nowinski WL, Qian G, Bhanu Prakash KN, Hu Q, Aziz A: Fast Talairach Transformation for magnetic resonance neuroimages. Journal of Computer Assisted Tomography 2006;30(4):629-641. [ pdf ]
- Volkau I, Bhanu Prakash K.N., Anand A, Aziz A, Nowinski WL: Extraction of the midsagittal plane from morphological neuroimages using the Kullback-Leibler’s measure. Medical Image Analysis 2006;10(6):863-874.
- Bhanu Prakash KN, Hu Q, Aziz A, Nowinski WL: Rapid and automatic identification of the anterior and posterior commissure point landmarks in MR volumetric neuroimages. Academic Radiology 2006;13(1):36-54. [ pdf ]
- Bhanu Prakash KN, Nowinski WL: Morphological relationship among the corpus callosum, fornix, anterior commissure and posterior commissure: MRI-based variability study. Academic Radiology 2006;13(1):24-35.
- Nowinski WL, Bhanu Prakash KN: Dorso-ventral extension of the Talairach transformation and its automated calculation for MR neuroimages. Journal of Computer Assisted Tomography 2005 Nov-Dec;29(6):863-879. [ pdf ]
- Hu Q, Qian G, Nowinski WL: Fast, accurate and automatic extraction of the modified Talairach cortical landmarks from MR images. Magnetic Resonance in Medicine 2005;53:970-976. [ pdf ]
- Hu Q, Nowinski WL: A rapid algorithm for robust and automatic extraction of the midsagittal plane of the human cerebrum from neuroimages based on local symmetry and outlier removal. NeuroImage 2003;20(4):2154-2166. [ pdf ]
- Xu MH, Nowinski WL: Talairach-Tournoux brain atlas registration using a metalforming principle based finite element method. Medical Image Analysis 2001;5(4):271-279. [ pdf ]
- Nowinski WL: Modified Talairach landmarks. Acta Neurochirurgica 2001;143(10);1045-1057. [ pdf ]
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| Atlas-assisted Functional Neurosurgery |
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- Nowinski Wl, Chua BC, Volkau I, Puspitasari F, Marchenko Y, Runge VM, Knopp MV: Simulation and assessment of cerebrovascular damage in deep brain stimulation using a stereotactic atlas of vasculature and structure derived from multiple 3T and 7T scans. Journal of Neurosurgery (in press).
- Nowinski WL: Anatomical and probabilistic functional atlases in stereotactic and functional neurosurgery. (Eds. Lozano A, Gildenberg P, Tasker R) Textbook of Stereotactic and Functional Neurosurgery, Springer 2009:395-441.
- Nowinski WL, Liu J, Thirunavuukarasuu A: Quantification and visualization of three-dimensional inconsistency of the globus pallidus internus in the Schaltenbrand-Wahren brain atlas. Stereotactic and Functional Neurosurgery 2006;84:236-242.
- Nowinski WL, Thirunavuukarasuu A, Liu J, Benabid AL: Correlation between the anatomical and functional human subthalamic nucleus. Stereotactic and Functional Neurosurgery 2007;85:88-93.
- Nowinski WL, Liu J, Thirunavuukarasuu A: Quantification of three-dimensional inconsistency of the subthalamic nucleus in the Schaltenbrand-Wahren brain atlas. Stereotactic and Functional Neurosurgery Stereotactic and Functional Neurosurgery 2006;84(1):46-55.
- Nowinski WL, Liu J, Thirunavuukarasuu A: Quantification and visualization of three-dimensional inconsistency of the globus pallidus internus in the Schaltenbrand-Wahren brain atlas. Stereotactic and Functional Neurosurgery 2006;84:236-242 (image on the cover page).
- Nowinski WL: Co-registration of the Schaltenbrand-Wahren microseries with the probabilistic functional atlas. Stereotactic Functional Neurosurgery 2004;82:142-146. [ pdf ]
- Nowinski WL, Belov D, Benabid AL: A community-centric internet portal for stereotactic and functional neurosurgery with a probabilistic functional atlas. Stereotactic and Functional Neurosurgery, Apr. 2003;79:1-12. [ pdf ]
- Benabid AL, Nowinski WL: Intraoperative robotics for the practice of neurosurgery: a surgeon's perspective, In: The Operating Room for the 21st Century (ed. Apuzzo ML). American Association of Neurological Surgeons, Rolling Meadows, 2003:103-118. [ pdf ]
- Nowinski WL, Benabid AL: New directions in atlas-assisted stereotactic functional neurosurgery, In: Advanced Techniques in Image-Guided Brain and Spine Surgery (ed. Germano IM). Thieme, New York, 2002:162-174. [ pdf ]
- Nowinski WL: Computerized brain atlases for surgery of movement disorders. Seminars in Neurosurgery 2001;12(2):183-194. [ pdf ]
- Nowinski WL, Yang GL, Yeo TT: Computer-aided stereotactic functional neurosurgery enhanced by the use of the multiple brain atlas database. IEEE Transactions on Medical Imaging, Jan. 2000;19(1):62-69. [ pdf ]
- Nowinski WL: Anatomical targeting in functional neurosurgery by the simultaneous use of multiple Schaltenbrand-Wahren brain atlas microseries. Stereotactic and Functional Neurosurgery, 1998;71(3):103-116.[ pdf ]
- Nowinski WL, Yeo TT, Thirunavuukarasuu A: Microelectrode-guided functional neurosurgery assisted by Electronic Clinical Brain Atlas CD-ROM. Computer Aided Surgery, 1998;3(3):115-122 [ pdf ]
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| Atlas-assisted Human Brain Mapping |
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- Nowinski WL, Thirunavuukarasuu A: A locus-driven mechanism for rapid and automated atlas-assisted analysis of functional images by using the Brain Atlas for Functional Imaging. Neurosurgical Focus, 15(1), Article 3, 2003. [ pdf ]
- Nowinski WL, Thirunavuukarasuu A: Atlas-assisted localization analysis of functional images. Medical Image Analysis, Sep. 2001;5(3):207-220. [ pdf ]
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| Atlas-assisted Neuroradiology |
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- Nowinski WL, Belov D: Towards atlas-assisted automatic interpretation of MRI morphological brain scans in the presence of tumor. Academic Radiology 2005 Aug;12(8):1049-1057 (Erratum 2005;12(10):1355). [ pdf ]
- Nowinski WL, Belov D: The Cerefy Neuroradiology Atlas: a Talairach-Tournoux atlas-based tool for analysis of neuroimages available over the internet. NeuroImage 2003;20(1):50-57. [ pdf ]
- Nowinski WL, Thirunavuukarasuu A: Electronic atlases show value in brain studies. Diagnostic Imaging Asia Pacific 2001;8(2):35-39. [ pdf ]
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| Atlas-assisted Stroke Image Interpretation |
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- Nowinski WL, Qian G, Bhanu Prakash KN, Volkau I, Leong WK, Huang S, Ananthasubramaniam A, Liu J, Ng TT, Gupta V: Stroke Suite: CAD systems for acute ischemic stroke, hemorrhagic stroke, and stroke in ER. (Eds. Gao X, Muller H, Loomers M, Comley R, Luo S) Medical Imaging and Informatics, Lecture Notes in Computer Science, Springer Volume 4987/2008: 377-386.
- Nowinski WL, Qian G, Bhanu Prakash KN, Thirunavuukarasuu A, Hu Q, Ivanov N, Parimal AS, Runge VL, Beauchamp NJ: Analysis of ischemic stroke MR images by means of brain atlases of anatomy and blood supply territories. Acad Radiol. 2006;13(8):1025-34. [ pdf ]
- Nowinski WL, Qian G, Bhanu Prakash KN, Volkau I, Hu Q, Thirunavuukarasuu A, Ivanov N, Parimal AS, Qiao Y, Ananthasubramaniam A, Huang S, Runge VM, Beauchamp NJ: Design and development of a computer aided diagnosis system for processing of acute ischemic stroke MR images. WSEAS Trans Biol Biomed. 2006;3(6):401-407. [ pdf ]
- Nowinski WL, Bhanu Prakash KN, Volkau I, Ananthasubramaniam A, Beauchamp NJ: Rapid and automatic calculation of the midsagittal plane in magnetic resonance diffusion and perfusion images. Academic Radiology 2006;13(5):652-663. [ pdf ]
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